Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Yersinia; s__Yersinia pestis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; s__Yersinia pestis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Yersinia; x__Yersinia pseudotuberculosis complex; s__Yersinia pestis
NCBI Strain Identifiers NCTC5923
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (385 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.53%
CheckM Contamination 0.22%
CheckM Strain Heterogeneity 75.0
5S Count 6
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 12
N50 Contigs 1,129,548 bp
Longest Contig 1,485,201 bp
Scaffold Count 12
N50 Scaffolds 1,129,548 bp
Longest Scaffold 1,485,201 bp
Genome Size 4,777,134 bp
Protein Count 4,300
Coding Density 83.26%
GC Percentage 47.58%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name 57940_B01
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA104281628
Country None
Date 2018-6-29
Genbank Assembly Accession GCA_900460465.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,556
Refseq Category na
Seq Rel Date 2018/06/29
Spanned Gaps 0
Species Taxid 632
SSU Count 6
Submitter SC
Taxid 632
Total Gap Length 0
Translation Table 11
tRNA Count (total) 68
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master UAVH00000000.1