Trueperella pyogenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Actinomycetaceae; g__Trueperella; s__Trueperella pyogenes
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Actinomycetales; f__Actinomycetaceae; g__Trueperella; s__Trueperella pyogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Actinomycetales; f__Actinomycetaceae; g__Trueperella; s__Trueperella pyogenes
NCBI Strain Identifiers NCTC5224
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (17 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.29%
CheckM Strain Heterogeneity 100.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 5
N50 Contigs 2,269,745 bp
Longest Contig 2,269,745 bp
Scaffold Count 5
N50 Scaffolds 2,269,745 bp
Longest Scaffold 2,269,745 bp
Genome Size 2,310,711 bp
Protein Count 2,089
Coding Density 90.14%
GC Percentage 59.57%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name 52223_D01
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA4535748
Country None
Date 2018-8-1
Genbank Assembly Accession GCA_900460345.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,024
Refseq Category na
Seq Rel Date 2018/08/01
Spanned Gaps 0
Species Taxid 1661
SSU Count 3
Submitter SC
Taxid 1661
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master UHHW00000000.1