Clostridium paraputrificum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium paraputrificum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium paraputrificum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Clostridiaceae; g__Clostridium; s__Clostridium paraputrificum
NCBI Strain Identifiers NCTC11833
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (12 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.19%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 100.0
5S Count 9
16S Count 11
23S Count 12
tRNA Count 20
Contig Count 20
N50 Contigs 975,231 bp
Longest Contig 1,376,545 bp
Scaffold Count 20
N50 Scaffolds 975,231 bp
Longest Scaffold 1,376,545 bp
Genome Size 3,627,436 bp
Protein Count 3,450
Coding Density 87.40%
GC Percentage 29.99%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name 52087_F01
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA4530643
Country None
Date 2018-6-29
Genbank Assembly Accession GCA_900447045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,391
Refseq Category na
Seq Rel Date 2018/06/29
Spanned Gaps 0
Species Taxid 29363
SSU Count 11
Submitter SC
Taxid 29363
Total Gap Length 0
Translation Table 11
tRNA Count (total) 81
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master UAWH00000000.1