Aeromonas salmonicida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
NCBI Strain Identifiers NCTC12959
GTDB Type Material Designation type strain of species
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.58%
CheckM Strain Heterogeneity 100.0
5S Count 9
16S Count 9
23S Count 9
tRNA Count 20
Contig Count 10
N50 Contigs 2,849,290 bp
Longest Contig 2,849,290 bp
Scaffold Count 10
N50 Scaffolds 2,849,290 bp
Longest Scaffold 2,849,290 bp
Genome Size 4,934,557 bp
Protein Count 4,699
Coding Density 85.74%
GC Percentage 58.33%
Ambiguous Bases 0
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 52121_E02
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA4530645
Country None
Date 2018-6-29
Genbank Assembly Accession GCA_900445115.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,599
Refseq Category na
Seq Rel Date 2018/06/29
Spanned Gaps 0
Species Taxid 645
SSU Count 9
Submitter SC
Taxid 645
Total Gap Length 0
Translation Table 11
tRNA Count (total) 114
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master UAPT00000000.1