Actinobacillus lignieresii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Actinobacillus; s__Actinobacillus lignieresii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Actinobacillus; s__Actinobacillus lignieresii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Actinobacillus; s__Actinobacillus lignieresii
NCBI Strain Identifiers NCTC4189
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (31 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.89%
CheckM Contamination 1.02%
CheckM Strain Heterogeneity 66.67
5S Count 4
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 2
N50 Contigs 2,227,799 bp
Longest Contig 2,227,799 bp
Scaffold Count 2
N50 Scaffolds 2,227,799 bp
Longest Scaffold 2,227,799 bp
Genome Size 2,236,520 bp
Protein Count 2,082
Coding Density 88.29%
GC Percentage 41.41%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name 50450_B01
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA4384238
Country None
Date 2018-8-7
Genbank Assembly Accession GCA_900444945.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,049
Refseq Category na
Seq Rel Date 2018/08/07
Spanned Gaps 0
Species Taxid 720
SSU Count 6
Submitter SC
Taxid 720
Total Gap Length 0
Translation Table 11
tRNA Count (total) 61
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master UFRM00000000.1