Pseudomonas delhiensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas delhiensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas delhiensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas delhiensis
NCBI Strain Identifiers RLD-1
GTDB Type Material Designation type strain of species
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 2.14%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 81
N50 Contigs 168,606 bp
Longest Contig 426,943 bp
Scaffold Count 81
N50 Scaffolds 168,606 bp
Longest Scaffold 426,943 bp
Genome Size 6,727,430 bp
Protein Count 5,906
Coding Density 87.52%
GC Percentage 68.07%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name IMG-taxon 2706795031 annotated assembly
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN06295949
Country None
Date 2017-7-16
Genbank Assembly Accession GCA_900187975.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 5,895
Refseq Category na
Seq Rel Date 2017/07/16
Spanned Gaps 0
Species Taxid 366289
SSU Count 1
Submitter DOE - JOINT GENOME INSTITUTE
Taxid 366289
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master FZPC00000000.1