Marinovum algicola
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Marinovum; s__Marinovum algicola
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Marinovum; s__Marinovum algicola
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Marinovum; s__Marinovum algicola
NCBI Strain Identifiers CECT 5396
GTDB Type Material Designation type strain of species
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.34%
CheckM Contamination 0.38%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 63
N50 Contigs 203,721 bp
Longest Contig 888,700 bp
Scaffold Count 63
N50 Scaffolds 203,721 bp
Longest Scaffold 888,700 bp
Genome Size 5,304,586 bp
Protein Count 5,114
Coding Density 90.42%
GC Percentage 65.04%
Ambiguous Bases 0
GTDB representative GCF_900109145.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name M.algicola_CECT5396_Spades_Prokka
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA102060418
Country None
Date 2017-4-29
Genbank Assembly Accession GCA_900172245.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 5,076
Refseq Category na
Seq Rel Date 2017/04/29
Spanned Gaps 0
Species Taxid 42444
SSU Count 1
Submitter UVEG
Taxid 42444
Total Gap Length 0
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master FWFM00000000.1