Streptococcus salivarius
Isolate HQ 5S/16S/23S 16 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
NCBI Strain Identifiers ATCC 7073
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000785515.1)
Genome Characteristics
CheckM Completeness 99.46%
CheckM Contamination 0.15%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 16
Contig Count 26
N50 Contigs 296,737 bp
Longest Contig 539,798 bp
Scaffold Count 18
N50 Scaffolds 296,737 bp
Longest Scaffold 659,323 bp
Genome Size 2,162,983 bp
Protein Count 1,990
Coding Density 87.99%
GC Percentage 40.03%
Ambiguous Bases N/A
GTDB representative GCA_000785515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name IMG-taxon 2687453658 annotated assembly
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN05421814
Country None
Date 2016-12-3
Genbank Assembly Accession GCA_900143035.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,985
Refseq Category na
Seq Rel Date 2016/12/03
Spanned Gaps 8
Species Taxid 1304
SSU Count 2
Submitter DOE - JOINT GENOME INSTITUTE
Taxid 1304
Total Gap Length 7649
Translation Table 11
tRNA Count (total) 34
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master FRCU00000000.1