Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Devosiaceae; g__Devosia; s__Devosia limi
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Hyphomicrobiaceae; g__Devosia; s__Devosia limi
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Hyphomicrobiaceae; g__Devosia; s__Devosia limi; x__Devosia limi DSM 17137
NCBI Strain Identifiers DSM 17137
GTDB Type Material Designation type strain of species
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 99.49%
CheckM Contamination 1.09%
CheckM Strain Heterogeneity 40.0
5S Count 2
16S Count 0
23S Count 1
tRNA Count 19
Contig Count 29
N50 Contigs 267,293 bp
Longest Contig 438,637 bp
Scaffold Count 25
N50 Scaffolds 302,432 bp
Longest Scaffold 730,627 bp
Genome Size 4,297,655 bp
Protein Count 4,108
Coding Density 88.51%
GC Percentage 62.72%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name IMG-taxon 2582580747 annotated assembly
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02745223
Country None
Date 2016-12-3
Genbank Assembly Accession GCA_900128975.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,043
Refseq Category representative genome
Seq Rel Date 2016/12/03
Spanned Gaps 4
Species Taxid 288995
SSU Count 0
Submitter DOE - JOINT GENOME INSTITUTE
Taxid 1121477
Total Gap Length 428
Translation Table 11
tRNA Count (total) 44
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master FQVC00000000.1