Helicobacter pylori_BU
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori_BU
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
NCBI Strain Identifiers HE147;HE147/09;09
GTDB Type Material Designation not type material
GTDB Representative of Species True (322 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.57%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 1
N50 Contigs 1,667,712 bp
Longest Contig 1,667,712 bp
Scaffold Count 1
N50 Scaffolds 1,667,712 bp
Longest Scaffold 1,667,712 bp
Genome Size 1,667,712 bp
Protein Count 1,582
Coding Density 90.26%
GC Percentage 39.11%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name HE147_09
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA4554838
Country None
Date 2017-7-7
Genbank Assembly Accession GCA_900120335.1
Genome Category Isolate
Genome Representation full
Isolate HE147/09
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 1,599
Refseq Category na
Seq Rel Date 2017/07/07
Spanned Gaps 0
Species Taxid 210
SSU Count 2
Submitter Institute of Medical Microbiology and Hospital Epidemiology
Taxid 210
Total Gap Length 0
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None