Massilia_A namucuonensis
Isolate HQ 5S/16S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Massilia_A; s__Massilia_A namucuonensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Oxalobacteraceae; g__Massilia; s__Massilia namucuonensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Oxalobacteraceae; g__Massilia; s__Massilia namucuonensis
NCBI Strain Identifiers CGMCC 1.11014
GTDB Type Material Designation type strain of species
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 99.87%
CheckM Contamination 0.65%
CheckM Strain Heterogeneity 25.0
5S Count 7
16S Count 1
23S Count 0
tRNA Count 19
Contig Count 112
N50 Contigs 157,607 bp
Longest Contig 430,591 bp
Scaffold Count 103
N50 Scaffolds 164,386 bp
Longest Scaffold 501,006 bp
Genome Size 8,489,111 bp
Protein Count 7,057
Coding Density 90.99%
GC Percentage 66.70%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name IMG-taxon 2671180040 annotated assembly
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN05216552
Country None
Date 2016-11-5
Genbank Assembly Accession GCA_900116645.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 7,089
Refseq Category representative genome
Seq Rel Date 2016/11/05
Spanned Gaps 9
Species Taxid 1035707
SSU Count 5
Submitter DOE - JOINT GENOME INSTITUTE
Taxid 1035707
Total Gap Length 4297
Translation Table 11
tRNA Count (total) 68
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master FPBO00000000.1