Pasteurella multocida
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
NCBI Strain Identifiers ATCC 51689
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.32%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 2
23S Count 1
tRNA Count 18
Contig Count 16
N50 Contigs 236,869 bp
Longest Contig 541,914 bp
Scaffold Count 14
N50 Scaffolds 298,439 bp
Longest Scaffold 541,914 bp
Genome Size 2,269,999 bp
Protein Count 2,114
Coding Density 89.94%
GC Percentage 40.26%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name IMG-taxon 2684623041 annotated assembly
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN05421675
Country None
Date 2016-11-2
Genbank Assembly Accession GCA_900115485.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,106
Refseq Category na
Seq Rel Date 2016/11/02
Spanned Gaps 2
Species Taxid 747
SSU Count 6
Submitter DOE - JOINT GENOME INSTITUTE
Taxid 747
Total Gap Length 331
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master FOWO00000000.1