Nitrosomonas sp900112825
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Nitrosomonadaceae; g__Nitrosomonas; s__Nitrosomonas sp900112825
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Nitrosomonadales; f__Nitrosomonadaceae; g__Nitrosomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Nitrosomonadales; f__Nitrosomonadaceae; g__Nitrosomonas; s__Nitrosomonas sp. Nm166
NCBI Strain Identifiers Nm166
GTDB Type Material Designation not type material
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 99.52%
CheckM Contamination 0.4%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 127
N50 Contigs 52,200 bp
Longest Contig 158,062 bp
Scaffold Count 126
N50 Scaffolds 56,022 bp
Longest Scaffold 158,062 bp
Genome Size 3,205,138 bp
Protein Count 3,048
Coding Density 85.87%
GC Percentage 45.17%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name IMG-taxon 2675903035 annotated assembly
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN05428977
Country None
Date 2016-11-2
Genbank Assembly Accession GCA_900112825.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,971
Refseq Category na
Seq Rel Date 2016/11/02
Spanned Gaps 1
Species Taxid 1881054
SSU Count 1
Submitter DOE - JOINT GENOME INSTITUTE
Taxid 1881054
Total Gap Length 982
Translation Table 11
tRNA Count (total) 39
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master FONE00000000.1