Thiomicrospira sp900112445
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Thiomicrospirales; f__Thiomicrospiraceae; g__Thiomicrospira; s__Thiomicrospira sp900112445
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Thiotrichales; f__Piscirickettsiaceae; g__Thiomicrospira; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Thiotrichales; f__Piscirickettsiaceae; g__Thiomicrospira; s__Thiomicrospira sp. ALE5
NCBI Strain Identifiers ALE5
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 8
N50 Contigs 505,842 bp
Longest Contig 876,177 bp
Scaffold Count 7
N50 Scaffolds 1,384,136 bp
Longest Scaffold 1,384,136 bp
Genome Size 2,060,511 bp
Protein Count 1,996
Coding Density 93.35%
GC Percentage 45.69%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name IMG-taxon 2593339253 annotated assembly
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03092900
Country None
Date 2016-11-2
Genbank Assembly Accession GCA_900112445.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,982
Refseq Category na
Seq Rel Date 2016/11/02
Spanned Gaps 1
Species Taxid 748650
SSU Count 3
Submitter DOE - JOINT GENOME INSTITUTE
Taxid 748650
Total Gap Length 2117
Translation Table 11
tRNA Count (total) 37
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master FOYY00000000.1