Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio hangzhouensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio hangzhouensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio hangzhouensis
NCBI Strain Identifiers CGMCC 1.7062
GTDB Type Material Designation type strain of species
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 99.84%
CheckM Contamination 3.6%
CheckM Strain Heterogeneity 10.71
5S Count 2
16S Count 1
23S Count 0
tRNA Count 16
Contig Count 60
N50 Contigs 171,219 bp
Longest Contig 425,865 bp
Scaffold Count 60
N50 Scaffolds 171,219 bp
Longest Scaffold 425,865 bp
Genome Size 5,123,217 bp
Protein Count 4,667
Coding Density 87.79%
GC Percentage 46.57%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name IMG-taxon 2617270906 annotated assembly
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04488244
Country None
Date 2016-10-24
Genbank Assembly Accession GCA_900107935.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,612
Refseq Category na
Seq Rel Date 2016/10/24
Spanned Gaps 0
Species Taxid 462991
SSU Count 6
Submitter DOE - JOINT GENOME INSTITUTE
Taxid 462991
Total Gap Length 0
Translation Table 11
tRNA Count (total) 55
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master FNVG00000000.1