Eubacterium_O barkeri
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Eubacteriales; f__Eubacteriaceae; g__Eubacterium_O; s__Eubacterium_O barkeri
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Eubacteriaceae; g__Eubacterium; s__Eubacterium barkeri
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Eubacteriaceae; g__Eubacterium; s__Eubacterium barkeri
NCBI Strain Identifiers VPI 5359
GTDB Type Material Designation type strain of species
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 98.59%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 1
tRNA Count 18
Contig Count 46
N50 Contigs 95,042 bp
Longest Contig 280,339 bp
Scaffold Count 45
N50 Scaffolds 95,042 bp
Longest Scaffold 280,339 bp
Genome Size 2,954,329 bp
Protein Count 2,782
Coding Density 90.73%
GC Percentage 48.17%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name IMG-taxon 2642422543 annotated assembly
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04488579
Country None
Date 2016-10-22
Genbank Assembly Accession GCA_900107125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,755
Refseq Category na
Seq Rel Date 2016/10/22
Spanned Gaps 1
Species Taxid 1528
SSU Count 3
Submitter DOE - JOINT GENOME INSTITUTE
Taxid 1528
Total Gap Length 95
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master FNOU00000000.1