Tyzzerella nexilis
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes_A; c__Clostridia; o__Lachnospirales; f__Lachnospiraceae; g__Tyzzerella; s__Tyzzerella nexilis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Lachnospiraceae; g__Tyzzerella; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Clostridia; o__Clostridiales; f__Lachnospiraceae; g__Tyzzerella; s__Tyzzerella sp. Marseille-P3062
NCBI Strain Identifiers Marseille-P3062
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.37%
CheckM Contamination 0.32%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 4
tRNA Count 18
Contig Count 7
N50 Contigs 2,878,399 bp
Longest Contig 2,878,399 bp
Scaffold Count 7
N50 Scaffolds 2,878,400 bp
Longest Scaffold 2,878,400 bp
Genome Size 3,601,259 bp
Protein Count 3,436
Coding Density 90.28%
GC Percentage 40.21%
Ambiguous Bases 0
GTDB representative GCF_000156035.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name PRJEB16356
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA4519291
Country None
Date 2016-10-27
Genbank Assembly Accession GCA_900104635.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 3,420
Refseq Category na
Seq Rel Date 2016/10/27
Spanned Gaps 0
Species Taxid 1870993
SSU Count 2
Submitter URMITE
Taxid 1870993
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master FNWC00000000.1