Pseudomonas delhiensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas delhiensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas delhiensis
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas delhiensis
NCBI Strain Identifiers CCM 7361
GTDB Type Material Designation type strain of species
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 2.14%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 111
N50 Contigs 116,654 bp
Longest Contig 295,316 bp
Scaffold Count 101
N50 Scaffolds 125,662 bp
Longest Scaffold 295,316 bp
Genome Size 6,710,571 bp
Protein Count 5,918
Coding Density 87.56%
GC Percentage 68.08%
Ambiguous Bases 0
GTDB representative GCF_900187975.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name IMG-taxon 2671180033 annotated assembly
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN05216189
Country None
Date 2016-10-21
Genbank Assembly Accession GCA_900099945.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 5,891
Refseq Category na
Seq Rel Date 2016/10/21
Spanned Gaps 10
Species Taxid 366289
SSU Count 2
Submitter DOE - JOINT GENOME INSTITUTE
Taxid 366289
Total Gap Length 3294
Translation Table 11
tRNA Count (total) 56
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master FNEC00000000.1