Variovorax sp900099805
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Variovorax; s__Variovorax sp900099805
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Comamonadaceae; g__Variovorax; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Comamonadaceae; g__Variovorax; s__Variovorax sp. OV700
NCBI Strain Identifiers OV700
GTDB Type Material Designation not type material
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.39%
CheckM Strain Heterogeneity 66.67
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 36
N50 Contigs 531,311 bp
Longest Contig 776,038 bp
Scaffold Count 36
N50 Scaffolds 531,311 bp
Longest Scaffold 776,038 bp
Genome Size 6,483,567 bp
Protein Count 5,985
Coding Density 92.34%
GC Percentage 65.69%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name IMG-taxon 2687453678 annotated assembly
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN05444748
Country None
Date 2016-10-21
Genbank Assembly Accession GCA_900099805.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 5,986
Refseq Category na
Seq Rel Date 2016/10/21
Spanned Gaps 0
Species Taxid 1882826
SSU Count 2
Submitter DOE - JOINT GENOME INSTITUTE
Taxid 1882826
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master FNDR00000000.1