Lactococcus lactis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Lactococcus; s__Lactococcus lactis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Lactococcus; s__Lactococcus lactis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Lactococcus; s__Lactococcus lactis
NCBI Strain Identifiers ATCC 19435
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (143 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.62%
CheckM Contamination 0.38%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 53
N50 Contigs 154,151 bp
Longest Contig 447,052 bp
Scaffold Count 51
N50 Scaffolds 194,539 bp
Longest Scaffold 447,052 bp
Genome Size 2,514,221 bp
Protein Count 2,523
Coding Density 86.87%
GC Percentage 35.22%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name IMG-taxon 2597490350 annotated assembly
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02982984
Country None
Date 2016-10-13
Genbank Assembly Accession GCA_900099625.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,499
Refseq Category na
Seq Rel Date 2016/10/13
Spanned Gaps 2
Species Taxid 1358
SSU Count 3
Submitter DOE - JOINT GENOME INSTITUTE
Taxid 1358
Total Gap Length 495
Translation Table 11
tRNA Count (total) 55
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master FMTF00000000.1