| GTDB Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E cerasi |
|---|---|
| Filtered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas cerasi |
| Unfiltered NCBI Taxonomy | d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas cerasi |
| NCBI Strain Identifiers | Sour cherry (Prunus cerasus) symptomatic leaf |
| GTDB Type Material Designation | not type material |
| GTDB Representative of Species | True (36 genomes in species cluster) |
| CheckM Completeness | 99.68% |
|---|---|
| CheckM Contamination | 0.22% |
| CheckM Strain Heterogeneity | 0.0 |
| 5S Count | 5 |
| 16S Count | 5 |
| 23S Count | 5 |
| tRNA Count | 20 |
| Contig Count | 7 |
| N50 Contigs | 5,891,735 bp |
| Longest Contig | 5,891,735 bp |
| Scaffold Count | 7 |
| N50 Scaffolds | 5,891,735 bp |
| Longest Scaffold | 5,891,735 bp |
| Genome Size | 6,345,256 bp |
| Protein Count | 5,774 |
| Coding Density | 87.45% |
| GC Percentage | 58.78% |
| Ambiguous Bases | 2 |
| GTDB representative of species | True |
| Assembly Level | Complete Genome |
|---|---|
| Assembly Name | PCPL58T |
| Assembly Type | n/a |
| Bioproject | PRJNA224116 |
| Biosample | SAMEA3894894 |
| Country | None |
| Date | 2016-7-1 |
| Genbank Assembly Accession | GCA_900074915.1 |
| Genome Category | Isolate |
| Genome Representation | full |
| Isolate | Sour cherry (Prunus cerasus) symptomatic leaf |
| Isolation Source | Sour cherry (Prunus cerasus) symptomatic leaf |
| Latitude Longitude | None |
| Molecule Count | 7 |
| CDS Count | 5,892 |
| Refseq Category | na |
| Seq Rel Date | 2016/07/01 |
| Spanned Gaps | 0 |
| Species Taxid | 1583341 |
| SSU Count | 5 |
| Submitter | JLU |
| Taxid | 1583341 |
| Total Gap Length | 0 |
| Translation Table | 11 |
| tRNA Count (total) | 64 |
| Type Material | None |
| Unspanned Gaps | 0 |
| Version Status | latest |
| WGS Master | None |