Pantoea ludwigii_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Pantoea; s__Pantoea ludwigii_B
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; s__Enterobacter ludwigii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Enterobacter; x__Enterobacter cloacae complex; s__Enterobacter ludwigii
NCBI Strain Identifiers EnVs6
GTDB Type Material Designation not type material
GTDB Representative of Species True (5 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.73%
CheckM Contamination 0.15%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 64
N50 Contigs 208,468 bp
Longest Contig 1,017,673 bp
Scaffold Count 36
N50 Scaffolds 624,603 bp
Longest Scaffold 1,301,251 bp
Genome Size 5,220,112 bp
Protein Count 4,830
Coding Density 88.94%
GC Percentage 54.62%
Ambiguous Bases 160
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name EnVs6.FASTA
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA3213010
Country None
Date 2015-4-20
Genbank Assembly Accession GCA_900068835.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,775
Refseq Category na
Seq Rel Date 2015/04/20
Spanned Gaps 28
Species Taxid 299767
SSU Count 1
Submitter FONDAZIONE EDMUND MACH
Taxid 299767
Total Gap Length 3411
Translation Table 11
tRNA Count (total) 83
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master CEFO00000000.1