Streptococcus suis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
NCBI Strain Identifiers LSS20
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000294495.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.06%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 39
N50 Contigs 123,207 bp
Longest Contig 246,843 bp
Scaffold Count 39
N50 Scaffolds 123,207 bp
Longest Scaffold 246,843 bp
Genome Size 2,263,408 bp
Protein Count 2,261
Coding Density 88.31%
GC Percentage 40.80%
Ambiguous Bases 1
GTDB representative GCA_000294495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 7114_5#20
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1316631
Country United Kingdom
Date 2016-2-13
Genbank Assembly Accession GCA_900065385.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,278
Refseq Category na
Seq Rel Date 2016/02/13
Spanned Gaps 0
Species Taxid 1307
SSU Count 1
Submitter SC
Taxid 1307
Total Gap Length 0
Translation Table 11
tRNA Count (total) 32
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master FIFT00000000.1