Legionella pneumophila
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Legionellales; f__Legionellaceae; g__Legionella; s__Legionella pneumophila
NCBI Strain Identifiers 2531STDY5467367
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000008485.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 72
N50 Contigs 101,986 bp
Longest Contig 181,178 bp
Scaffold Count 72
N50 Scaffolds 101,986 bp
Longest Scaffold 181,178 bp
Genome Size 3,547,658 bp
Protein Count 3,236
Coding Density 88.55%
GC Percentage 38.31%
Ambiguous Bases N/A
GTDB representative GCA_000008485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 10060_4#86
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2060127
Country None
Date 2016-2-22
Genbank Assembly Accession GCA_900059945.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,208
Refseq Category na
Seq Rel Date 2016/02/22
Spanned Gaps 0
Species Taxid 446
SSU Count 2
Submitter SC
Taxid 446
Total Gap Length 0
Translation Table 11
tRNA Count (total) 42
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master FJDC00000000.1