Streptococcus suis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
NCBI Strain Identifiers LSS25
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000294495.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.38%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 51
N50 Contigs 95,281 bp
Longest Contig 164,917 bp
Scaffold Count 51
N50 Scaffolds 95,281 bp
Longest Scaffold 164,917 bp
Genome Size 2,114,608 bp
Protein Count 2,084
Coding Density 88.49%
GC Percentage 41.11%
Ambiguous Bases N/A
GTDB representative GCA_000294495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name 7114_5#25
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1316582
Country United Kingdom
Date 2016-2-13
Genbank Assembly Accession GCA_900059755.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,110
Refseq Category na
Seq Rel Date 2016/02/13
Spanned Gaps 0
Species Taxid 1307
SSU Count 1
Submitter SC
Taxid 1307
Total Gap Length 0
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master FIFY00000000.1