Streptococcus suis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
NCBI Strain Identifiers FX428_1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000294495.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 25
N50 Contigs 170,462 bp
Longest Contig 285,003 bp
Scaffold Count 24
N50 Scaffolds 214,770 bp
Longest Scaffold 404,711 bp
Genome Size 2,040,458 bp
Protein Count 1,951
Coding Density 88.07%
GC Percentage 41.09%
Ambiguous Bases 1
GTDB representative GCA_000294495.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 8525_5#9
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA1566126
Country Viet Nam
Date 2016-2-12
Genbank Assembly Accession GCA_900057535.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,003
Refseq Category na
Seq Rel Date 2016/02/12
Spanned Gaps 1
Species Taxid 1307
SSU Count 1
Submitter SC
Taxid 1307
Total Gap Length 44
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master FITC00000000.1