Listeria monocytogenes_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes_B
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
NCBI Strain Identifiers 2842STDY5753870
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000307025.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 26
N50 Contigs 278,028 bp
Longest Contig 547,888 bp
Scaffold Count 17
N50 Scaffolds 455,862 bp
Longest Scaffold 1,145,277 bp
Genome Size 3,106,383 bp
Protein Count 3,064
Coding Density 89.81%
GC Percentage 37.80%
Ambiguous Bases N/A
GTDB representative GCA_000307025.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 12754_4#82
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2383292
Country None
Date 2016-2-10
Genbank Assembly Accession GCA_900043345.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,116
Refseq Category na
Seq Rel Date 2016/02/10
Spanned Gaps 9
Species Taxid 1639
SSU Count 1
Submitter SC
Taxid 1639
Total Gap Length 2542
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master FFEP00000000.1