Listeria monocytogenes
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
NCBI Strain Identifiers 2842STDY5753913
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900187225.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.27%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 22
N50 Contigs 500,842 bp
Longest Contig 604,928 bp
Scaffold Count 19
N50 Scaffolds 508,234 bp
Longest Scaffold 604,928 bp
Genome Size 3,006,666 bp
Protein Count 2,986
Coding Density 89.78%
GC Percentage 37.84%
Ambiguous Bases N/A
GTDB representative GCA_900187225.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name 12754_5#30
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMEA2383335
Country None
Date 2016-2-10
Genbank Assembly Accession GCA_900036625.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,023
Refseq Category na
Seq Rel Date 2016/02/10
Spanned Gaps 3
Species Taxid 1639
SSU Count 1
Submitter SC
Taxid 1639
Total Gap Length 857
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master FFFF00000000.1