Staphylococcus epidermidis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus epidermidis
NCBI Strain Identifiers NBRC 100911
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (615 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.81%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 2
N50 Contigs 2,422,602 bp
Longest Contig 2,422,602 bp
Scaffold Count 2
N50 Scaffolds 2,422,602 bp
Longest Scaffold 2,422,602 bp
Genome Size 2,427,041 bp
Protein Count 2,195
Coding Density 82.82%
GC Percentage 32.29%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM674220v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00169832
Country None
Date 2019-06-11
Genbank Assembly Accession GCA_006742205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 2
CDS Count 2,313
Refseq Category na
Seq Rel Date 2019/06/11
Spanned Gaps 0
Species Taxid 1282
SSU Count 6
Submitter Biological Resource Center, National Institute of Technology and Evaluation (NBRC)
Taxid 1282
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None