Micromonospora arenicola
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Micromonosporaceae; g__Micromonospora; s__Micromonospora arenicola
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micromonosporales; f__Micromonosporaceae; g__Salinispora; s__Salinispora arenicola
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micromonosporales; f__Micromonosporaceae; g__Salinispora; s__Salinispora arenicola
NCBI Strain Identifiers DSM 44819
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (45 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.24%
CheckM Contamination 0.46%
CheckM Strain Heterogeneity 50.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 5,632,046 bp
Longest Contig 5,632,046 bp
Scaffold Count 1
N50 Scaffolds 5,632,046 bp
Longest Scaffold 5,632,046 bp
Genome Size 5,632,046 bp
Protein Count 4,955
Coding Density 87.14%
GC Percentage 69.48%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM671606v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN11512364
Country None
Date 2019-07-08
Genbank Assembly Accession GCA_006716065.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 5,031
Refseq Category na
Seq Rel Date 2019/07/08
Spanned Gaps 0
Species Taxid 168697
SSU Count 3
Submitter DOE Joint Genome Institute
Taxid 168697
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master VFOL00000000.1