Streptococcus suis_W
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis_W
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus suis
NCBI Strain Identifiers WUSS425
GTDB Type Material Designation not type material
GTDB Representative of Species True (54 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 30
N50 Contigs 155,977 bp
Longest Contig 366,673 bp
Scaffold Count 28
N50 Scaffolds 155,977 bp
Longest Scaffold 366,673 bp
Genome Size 2,208,580 bp
Protein Count 2,057
Coding Density 88.49%
GC Percentage 41.06%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM492291v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN11431428
Country None
Date 2019-04-29
Genbank Assembly Accession GCA_004922915.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,106
Refseq Category na
Seq Rel Date 2019/04/29
Spanned Gaps 2
Species Taxid 1307
SSU Count 1
Submitter Nanjing Agricultural University
Taxid 1307
Total Gap Length 20
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master SSXP00000000.1