Streptococcus thermophilus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus thermophilus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus thermophilus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus thermophilus
NCBI Strain Identifiers ATCC 19258
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (58 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.89%
CheckM Contamination 0.4%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 4
tRNA Count 20
Contig Count 88
N50 Contigs 55,173 bp
Longest Contig 195,529 bp
Scaffold Count 86
N50 Scaffolds 55,173 bp
Longest Scaffold 195,529 bp
Genome Size 2,074,705 bp
Protein Count 2,277
Coding Density 84.42%
GC Percentage 38.94%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM435450v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN08493372
Country None
Date 2019-03-18
Genbank Assembly Accession GCA_004354505.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,207
Refseq Category na
Seq Rel Date 2019/03/18
Spanned Gaps 2
Species Taxid 1308
SSU Count 3
Submitter Carlsberg Research Laboratory
Taxid 1308
Total Gap Length 23
Translation Table 11
tRNA Count (total) 46
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master PRKU00000000.1