Mannheimia haemolytica
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Mannheimia; s__Mannheimia haemolytica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Mannheimia; s__Mannheimia haemolytica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Mannheimia; s__Mannheimia haemolytica
NCBI Strain Identifiers DSM 10531
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (125 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.81%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 72
N50 Contigs 78,910 bp
Longest Contig 140,937 bp
Scaffold Count 71
N50 Scaffolds 78,910 bp
Longest Scaffold 140,937 bp
Genome Size 2,583,665 bp
Protein Count 2,631
Coding Density 89.35%
GC Percentage 41.13%
Ambiguous Bases 5
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM434211v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN10363427
Country None
Date 2019-03-11
Genbank Assembly Accession GCA_004342115.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,630
Refseq Category na
Seq Rel Date 2019/03/11
Spanned Gaps 1
Species Taxid 75985
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 75985
Total Gap Length 96
Translation Table 11
tRNA Count (total) 56
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master SMAC00000000.1