Pseudomonas_A sp004010935
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_A; s__Pseudomonas_A sp004010935
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; x__unclassified Pseudomonadaceae; s__Pseudomonadaceae bacterium SI-3
NCBI Strain Identifiers SI-3
GTDB Type Material Designation not type material
GTDB Representative of Species True (11 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.98%
CheckM Contamination 0.14%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 4
23S Count 4
tRNA Count 19
Contig Count 1
N50 Contigs 4,838,607 bp
Longest Contig 4,838,607 bp
Scaffold Count 1
N50 Scaffolds 4,838,607 bp
Longest Scaffold 4,838,607 bp
Genome Size 4,838,607 bp
Protein Count 4,455
Coding Density 88.59%
GC Percentage 60.22%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM401093v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN08364586
Country None
Date 2019-1-10
Genbank Assembly Accession GCA_004010935.1
Genome Category Isolate
Genome Representation full
Isolate SI-3
Isolation Source None
Latitude Longitude None
Molecule Count 1
CDS Count 4,404
Refseq Category na
Seq Rel Date 2019/01/10
Spanned Gaps 0
Species Taxid 2079806
SSU Count 4
Submitter Institute of Oceanology, Chinese Academy of Sciences
Taxid 2079806
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None