Rhizobium phaseoli
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Rhizobium; s__Rhizobium phaseoli
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Rhizobium; s__Rhizobium phaseoli
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; x__Rhizobium/Agrobacterium group; g__Rhizobium; s__Rhizobium phaseoli
NCBI Strain Identifiers ATCC 14482
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (25 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.28%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 3
tRNA Count 20
Contig Count 81
N50 Contigs 270,414 bp
Longest Contig 666,416 bp
Scaffold Count 80
N50 Scaffolds 270,414 bp
Longest Scaffold 666,416 bp
Genome Size 6,652,103 bp
Protein Count 6,365
Coding Density 87.00%
GC Percentage 61.36%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM398512v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN10387098
Country None
Date 2018-12-28
Genbank Assembly Accession GCA_003985125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,445
Refseq Category na
Seq Rel Date 2018/12/28
Spanned Gaps 1
Species Taxid 396
SSU Count 3
Submitter North West Agriculture and Forestry University
Taxid 396
Total Gap Length 10
Translation Table 11
tRNA Count (total) 50
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master RJJV00000000.1