Pseudomonas_E sp003231275
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E sp003231275
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas sp. WCHPs060044
NCBI Strain Identifiers WCHPs060044
GTDB Type Material Designation not type material
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.57%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 241
N50 Contigs 141,882 bp
Longest Contig 693,716 bp
Scaffold Count 241
N50 Scaffolds 141,882 bp
Longest Scaffold 693,716 bp
Genome Size 7,264,993 bp
Protein Count 6,492
Coding Density 89.51%
GC Percentage 62.26%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM323127v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN09302770
Country None
Date 2018-6-15
Genbank Assembly Accession GCA_003231275.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 6,550
Refseq Category na
Seq Rel Date 2018/06/15
Spanned Gaps 0
Species Taxid 2213017
SSU Count 1
Submitter West China Hospital, Sichuan University
Taxid 2213017
Total Gap Length 0
Translation Table 11
tRNA Count (total) 54
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master QKVL00000000.1