Gabonibacter massiliensis
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Marinifilaceae; g__Gabonibacter; s__Gabonibacter massiliensis
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Porphyromonadaceae; g__Sanguibacteroides; s__Sanguibacteroides justesenii
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Bacteroidia; o__Bacteroidales; f__Porphyromonadaceae; g__Sanguibacteroides; s__Sanguibacteroides justesenii
NCBI Strain Identifiers OUH 969102
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.46%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 30
N50 Contigs 397,220 bp
Longest Contig 669,695 bp
Scaffold Count 30
N50 Scaffolds 397,220 bp
Longest Scaffold 669,695 bp
Genome Size 3,434,369 bp
Protein Count 2,917
Coding Density 90.38%
GC Percentage 42.12%
Ambiguous Bases 0
GTDB representative GCF_001487125.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM320420v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN09280960
Country None
Date 2018-6-10
Genbank Assembly Accession GCA_003204205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,861
Refseq Category na
Seq Rel Date 2018/06/10
Spanned Gaps 0
Species Taxid 1547597
SSU Count 1
Submitter Odense University Hospital
Taxid 1547597
Total Gap Length 0
Translation Table 11
tRNA Count (total) 52
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master QJPL00000000.1