Pseudomonas delhiensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas delhiensis
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas sp. RW407
NCBI Strain Identifiers RW407
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900187975.1)
Genome Characteristics
CheckM Completeness 99.49%
CheckM Contamination 2.06%
CheckM Strain Heterogeneity 23.53
5S Count 5
16S Count 6
23S Count 6
tRNA Count 20
Contig Count 447
N50 Contigs 38,667 bp
Longest Contig 180,957 bp
Scaffold Count 108
N50 Scaffolds 1,606,954 bp
Longest Scaffold 2,099,695 bp
Genome Size 7,346,097 bp
Protein Count 6,572
Coding Density 87.00%
GC Percentage 67.42%
Ambiguous Bases N/A
GTDB representative GCA_900187975.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM317665v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN09232169
Country None
Date 2018-5-29
Genbank Assembly Accession GCA_003176655.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,638
Refseq Category na
Seq Rel Date 2018/05/29
Spanned Gaps 339
Species Taxid 2202894
SSU Count 6
Submitter Estacion Experimental del Zaidin, Spanish National Research Council
Taxid 2202894
Total Gap Length 3390
Translation Table 11
tRNA Count (total) 68
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master QGSL00000000.1