Limnohabitans sp003063265
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Burkholderiaceae; g__Limnohabitans; s__Limnohabitans sp003063265
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Comamonadaceae; g__Limnohabitans; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Burkholderiales; f__Comamonadaceae; g__Limnohabitans; s__Limnohabitans sp. WS1
NCBI Strain Identifiers WS1
GTDB Type Material Designation not type material
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.5%
CheckM Strain Heterogeneity 50.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 48
N50 Contigs 190,940 bp
Longest Contig 767,404 bp
Scaffold Count 48
N50 Scaffolds 190,940 bp
Longest Scaffold 767,404 bp
Genome Size 4,604,141 bp
Protein Count 4,239
Coding Density 90.47%
GC Percentage 59.17%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM306326v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN06661529
Country None
Date 2018-4-23
Genbank Assembly Accession GCA_003063265.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,206
Refseq Category na
Seq Rel Date 2018/04/23
Spanned Gaps 0
Species Taxid 1100726
SSU Count 2
Submitter Biology Centre CAS
Taxid 1100726
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master NERU00000000.1