Leptospira borgpetersenii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Leptospirae; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira borgpetersenii
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira borgpetersenii
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Leptospirales; f__Leptospiraceae; g__Leptospira; s__Leptospira borgpetersenii; x__Leptospira borgpetersenii serovar Javanica
NCBI Strain Identifiers DSM 21538
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (45 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.82%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 69
N50 Contigs 164,393 bp
Longest Contig 344,761 bp
Scaffold Count 69
N50 Scaffolds 164,393 bp
Longest Scaffold 344,761 bp
Genome Size 3,857,933 bp
Protein Count 3,387
Coding Density 82.32%
GC Percentage 40.08%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM304642v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN07620965
Country None
Date 2018-04-09
Genbank Assembly Accession GCA_003046425.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,646
Refseq Category na
Seq Rel Date 2018/04/09
Spanned Gaps 0
Species Taxid 174
SSU Count 1
Submitter DOE Joint Genome Institute
Taxid 280504
Total Gap Length 0
Translation Table 11
tRNA Count (total) 37
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master QAJG00000000.1