Aliivibrio sifiae
Isolate HQ 5S/16S/23S 18 tRNAs
Genome Characteristics
CheckM Completeness 99.63%
CheckM Contamination 0.34%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 74
N50 Contigs 235,907 bp
Longest Contig 556,370 bp
Scaffold Count 8
N50 Scaffolds 2,522,736 bp
Longest Scaffold 2,522,736 bp
Genome Size 4,743,237 bp
Protein Count 4,175
Coding Density 85.76%
GC Percentage 38.25%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM295471v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN06134495
Country None
Date 2018-2-27
Genbank Assembly Accession GCA_002954715.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 4,168
Refseq Category na
Seq Rel Date 2018/02/27
Spanned Gaps 66
Species Taxid 566293
SSU Count 0
Submitter Atmosphere and Ocean Research Institute, The University of Tokyo
Taxid 566293
Total Gap Length 111101
Translation Table 11
tRNA Count (total) 69
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master MSCP00000000.1