Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii
NCBI Strain Identifiers ABR2-13
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.73%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 0
23S Count 1
tRNA Count 15
Contig Count 163
N50 Contigs 63,408 bp
Longest Contig 290,702 bp
Scaffold Count 13
N50 Scaffolds 1,877,741 bp
Longest Scaffold 2,093,145 bp
Genome Size 5,410,489 bp
Protein Count 4,703
Coding Density 81.00%
GC Percentage 45.34%
Ambiguous Bases 0
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM295450v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN06133339
Country None
Date 2018-2-27
Genbank Assembly Accession GCA_002954505.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,761
Refseq Category na
Seq Rel Date 2018/02/27
Spanned Gaps 150
Species Taxid 680
SSU Count 0
Submitter Atmosphere and Ocean Research Institute, The University of Tokyo
Taxid 680
Total Gap Length 231168
Translation Table 11
tRNA Count (total) 71
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MSCE00000000.1