Nonlabens xylanidelens
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Nonlabens; s__Nonlabens xylanidelens
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Nonlabens; s__Nonlabens xylanidelens
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Nonlabens; s__Nonlabens xylanidelens
NCBI Strain Identifiers DSM 16809
GTDB Type Material Designation type strain of species
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 98.54%
CheckM Contamination 3.56%
CheckM Strain Heterogeneity 96.88
5S Count 9
16S Count 11
23S Count 12
tRNA Count 20
Contig Count 28
N50 Contigs 673,088 bp
Longest Contig 807,425 bp
Scaffold Count 28
N50 Scaffolds 673,088 bp
Longest Scaffold 807,425 bp
Genome Size 3,552,991 bp
Protein Count 3,275
Coding Density 88.57%
GC Percentage 34.98%
Ambiguous Bases 0
GTDB representative GCF_002934445.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM295434v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN06075351
Country None
Date 2018-2-27
Genbank Assembly Accession GCA_002954345.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 3,166
Refseq Category na
Seq Rel Date 2018/02/27
Spanned Gaps 0
Species Taxid 191564
SSU Count 11
Submitter Atmosphere and Ocean Research Institute, The University of Tokyo
Taxid 191564
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master MQVW00000000.1