Escherichia dysenteriae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia dysenteriae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Shigella; s__Shigella dysenteriae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Shigella; s__Shigella dysenteriae
NCBI Strain Identifiers ATCC 13313
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1,679 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.68%
CheckM Contamination 0.04%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 2
N50 Contigs 4,395,762 bp
Longest Contig 4,395,762 bp
Scaffold Count 2
N50 Scaffolds 4,395,762 bp
Longest Scaffold 4,395,762 bp
Genome Size 4,578,459 bp
Protein Count 5,234
Coding Density 84.55%
GC Percentage 50.98%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM294967v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN08330256
Country None
Date 2018-02-23
Genbank Assembly Accession GCA_002949675.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 2
CDS Count 5,217
Refseq Category na
Seq Rel Date 2018/02/23
Spanned Gaps 0
Species Taxid 622
SSU Count 7
Submitter CDC
Taxid 622
Total Gap Length 0
Translation Table 11
tRNA Count (total) 85
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None