Nonlabens xylanidelens
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Nonlabens; s__Nonlabens xylanidelens
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Nonlabens; s__Nonlabens xylanidelens
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Nonlabens; s__Nonlabens xylanidelens
NCBI Strain Identifiers DSM 16809
GTDB Type Material Designation type strain of species
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 98.54%
CheckM Contamination 0.19%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 2
23S Count 1
tRNA Count 20
Contig Count 22
N50 Contigs 469,666 bp
Longest Contig 1,129,740 bp
Scaffold Count 21
N50 Scaffolds 512,302 bp
Longest Scaffold 1,129,740 bp
Genome Size 3,276,842 bp
Protein Count 2,998
Coding Density 90.14%
GC Percentage 34.67%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM293444v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN05661059
Country None
Date 2018-2-21
Genbank Assembly Accession GCA_002934445.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,953
Refseq Category na
Seq Rel Date 2018/02/21
Spanned Gaps 1
Species Taxid 191564
SSU Count 3
Submitter DOE Joint Genome Institute
Taxid 191564
Total Gap Length 1725
Translation Table 11
tRNA Count (total) 30
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master PTJE00000000.1