Pasteurella multocida
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
NCBI Strain Identifiers PY81579
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.42%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 2
tRNA Count 18
Contig Count 44
N50 Contigs 117,759 bp
Longest Contig 410,604 bp
Scaffold Count 44
N50 Scaffolds 117,759 bp
Longest Scaffold 410,604 bp
Genome Size 2,270,584 bp
Protein Count 2,176
Coding Density 89.50%
GC Percentage 40.21%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM293077v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN07109565
Country None
Date 2018-2-17
Genbank Assembly Accession GCA_002930775.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,125
Refseq Category na
Seq Rel Date 2018/02/17
Spanned Gaps 0
Species Taxid 747
SSU Count 1
Submitter School of Medicine, University of Crete
Taxid 747
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master PSQI00000000.1