Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Pantoea; s__Pantoea dispersa
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Pantoea; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Erwiniaceae; g__Pantoea; s__Pantoea sp. ICBG 985
NCBI Strain Identifiers ICBG 985
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.96%
CheckM Contamination 0.25%
CheckM Strain Heterogeneity 0.0
5S Count 9
16S Count 1
23S Count 5
tRNA Count 20
Contig Count 33
N50 Contigs 703,296 bp
Longest Contig 1,239,849 bp
Scaffold Count 33
N50 Scaffolds 703,296 bp
Longest Scaffold 1,239,849 bp
Genome Size 4,931,632 bp
Protein Count 4,521
Coding Density 87.60%
GC Percentage 57.36%
Ambiguous Bases 0
GTDB representative GCF_000465555.2
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM292836v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN08357570
Country None
Date 2018-2-14
Genbank Assembly Accession GCA_002928365.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,554
Refseq Category na
Seq Rel Date 2018/02/14
Spanned Gaps 0
Species Taxid 2071683
SSU Count 4
Submitter UW-Madison
Taxid 2071683
Total Gap Length 0
Translation Table 11
tRNA Count (total) 74
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master POWM00000000.1