Staphylococcus capitis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Staphylococcales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus capitis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus capitis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Staphylococcaceae; g__Staphylococcus; s__Staphylococcus capitis; sb__Staphylococcus capitis subsp. capitis
NCBI Strain Identifiers NCTC 11045
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (82 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.81%
CheckM Contamination 0.06%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 87
N50 Contigs 101,914 bp
Longest Contig 300,584 bp
Scaffold Count 51
N50 Scaffolds 850,133 bp
Longest Scaffold 932,042 bp
Genome Size 2,434,909 bp
Protein Count 2,388
Coding Density 85.04%
GC Percentage 32.68%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM290232v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN06177166
Country None
Date 2018-1-27
Genbank Assembly Accession GCA_002902325.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,353
Refseq Category na
Seq Rel Date 2018/01/27
Spanned Gaps 36
Species Taxid 29388
SSU Count 2
Submitter Modernising Medical Microbiology
Taxid 72758
Total Gap Length 726
Translation Table 11
tRNA Count (total) 57
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master PPPY00000000.1