Pseudomonas_E putida_A
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas_E; s__Pseudomonas_E putida_A
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pseudomonadales; f__Pseudomonadaceae; g__Pseudomonas; s__Pseudomonas sp. GW456-12-10-14-LB1
NCBI Strain Identifiers GW456-12-10-14-LB1
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.84%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 123
N50 Contigs 110,991 bp
Longest Contig 264,844 bp
Scaffold Count 123
N50 Scaffolds 110,991 bp
Longest Scaffold 264,844 bp
Genome Size 6,213,145 bp
Protein Count 5,600
Coding Density 88.27%
GC Percentage 60.25%
Ambiguous Bases 0
GTDB representative GCF_002588485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM290160v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN08366474
Country None
Date 2018-1-27
Genbank Assembly Accession GCA_002901605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 5,767
Refseq Category na
Seq Rel Date 2018/01/27
Spanned Gaps 0
Species Taxid 2075547
SSU Count 1
Submitter ENIGMA - Ecosystems and Networks Integrated with Genes and Molecular Assemblies
Taxid 2075547
Total Gap Length 0
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master PPRX00000000.1