Escherichia marmotae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia marmotae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia marmotae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Escherichia; s__Escherichia marmotae
NCBI Strain Identifiers HT073016
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (49 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.97%
CheckM Contamination 0.33%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 7
tRNA Count 20
Contig Count 3
N50 Contigs 4,671,322 bp
Longest Contig 4,671,322 bp
Scaffold Count 3
N50 Scaffolds 4,671,322 bp
Longest Scaffold 4,671,322 bp
Genome Size 4,896,291 bp
Protein Count 4,655
Coding Density 87.23%
GC Percentage 50.40%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM290036v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN08361671
Country None
Date 2018-1-26
Genbank Assembly Accession GCA_002900365.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 3
CDS Count 4,909
Refseq Category na
Seq Rel Date 2018/01/26
Spanned Gaps 0
Species Taxid 1499973
SSU Count 7
Submitter Institute of Microbiology Chinese Academy of Sciences
Taxid 1499973
Total Gap Length 0
Translation Table 11
tRNA Count (total) 84
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None